UCSC Genome Bioinformatics

This tutorial shows how to find all the single nucleotide polymorphisms upstream from genes using the UCSC Genome Browser.

Transcript of video

0:43 - Set up the Genome Browser display to see your gene.
2:00 - Use the Table Browser to get upstream regions.
3:38 - Paste and view your upstream regions as a Custom Track.
5:23 - Intersect upstream regions with the SNP track.
6:43 - Load upstream SNPs as a new Custom Track.
 
run time: 4:33